[GUIDE] Ubuntu repository - maintained by djcj

[djcj]

Maybe writing a script (+ a small .ini file to fix the versions) which compiles all the tools would be the best solution,...

I'm currently writing a script. It may not be perfect but it may help and you can adjust it as needed.
By the way, I have removed my FLVExtractCL repository since you said only the sources from moitah.net should be used.
I have also seen that the aften entry on your page leads to http://code.google.com/p/wavtoac3encoder/downloads/list
and not to https://sourceforge.net/projects/aften/